Search results for "algebraic topology"

showing 10 items of 306 documents

Pearl-necklace structures of molecular brushes with rigid backbone under poor solvent conditions: A simulation study

2010

Bottle-brush polymers, where flexible side chains containing N=20 to 50 effective monomers are grafted to a rigid backbone, are studied by molecular dynamics simulations, varying the grafting density σ and the solvent quality. Whereas for poor solvents and large enough σ the molecular brush is a cylindrical object, homogeneous in axial direction, for intermediate values of σ an axially inhomogeneous structure of "pearl-necklace" type is formed. The "pearls," however, have a strongly nonspherical ellipsoidal shape, due to the fact that several side chains cluster together in one pearl, qualitatively consistent with predictions of Sheiko et al. [Eur. Phys. J. E 13, 125 (2004)] We analyze the …

chemistry.chemical_classificationMaterials scienceMolecular StructurePolymersTemperatureGeneral Physics and AstronomyPolymerMolecular Dynamics Simulationchemistry.chemical_compoundMolecular dynamicsMonomerChain (algebraic topology)chemistryChemical physicsComputational chemistrySolventsCluster (physics)Side chainCylinderPhysical and Theoretical ChemistryAxial symmetryThe Journal of Chemical Physics
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Alternating Ferro/Antiferromagnetic Copper(II) Chain Containing an Unprecedented Triple Formato/Hydroxido/Sulfato Bridge.

2016

The first example of a triple formato/hydroxido/sulfato (FHS) bridge for any metal is reported in compound [Cu2(bpym)(OH)(HCO2)(SO4)(H2O)2]·3H2O (1). Its structure shows the presence of alternating triple FHS bridges and 2,2'-bipyrimidine (bpym) ones. Although in the initial synthesis the sulfate anions were introduced accidentally, here we report the rational synthesis and the magnetic properties of this compound. The magnetic properties show that 1 is an alternating ferro/antiferromagnetic (F/AF) chain compound with predominant antiferromagnetic interactions and were fit to an alternating F/AF S = (1)/2 chain with g = 2.103, JAF = -139 cm(-1), and JF = 116 cm(-1) (α = JF/|JAF| = 0.83). Th…

chemistry.chemical_classification010405 organic chemistryStereochemistrychemistry.chemical_element010402 general chemistry01 natural sciencesCopper0104 chemical sciencesInorganic ChemistryMetalCrystallographyChain (algebraic topology)chemistryvisual_artvisual_art.visual_art_mediumAntiferromagnetismPhysical and Theoretical ChemistryBridged compoundsInorganic chemistry
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Inter-Chain Structure Factors of Flexible Polymers in Solutions: A Monte Carlo Investigation

1997

Off-lattice Monte Carlo simulations of both the single chain structure factor h(q) and the inter-chain structure factor HD(q) of flexible polymers in solutions are presented over a wide range of both wavenumber q and concentration c from the dilute to the concentrated regime, for chain lengths up to N = 256. The single chain properties $\{$gyration radius 〈Rg2〉, $h(q)\}$ are in reasonable agreement with the expected theoretical behavior, showing a crossover from swollen chains $\{\langle R_{\rm g}^2\rangle \propto N^{2\nu} ,~ h(q) \propto q^{-1/\nu}\}$ to Gaussian chains, and the data comply with a scaling description, with a correlation length ξ∝c-ν/(3ν-1). However, the inter-chain structu…

Physics and Astronomy (miscellaneous)ChemistryMonte Carlo methodGeneral EngineeringRadiusAtomic and Molecular Physics and OpticsChain (algebraic topology)Saturation (graph theory)WavenumberStatistical physicsAtomic physicsStructure factorRandom phase approximationScalingJournal de Physique II
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Stable Images and Discriminants

2020

We show that the discriminant/image of a stable perturbation of a germ of finite \(\mathcal {A}\)-codimension is a hypersurface with the homotopy type of a wedge of spheres in middle dimension, provided the target dimension does not exceed the source dimension by more than one. The number of spheres in the wedge is called the discriminant Milnor number/image Milnor number. We prove a lemma showing how to calculate this number, and show that when the target dimension does not exceed the source dimension, the discriminant Milnor number and the \(\mathcal {A}\)-codimension obey the “Milnor–Tjurina relation” familiar in the case of isolated hypersurface singularities. This relation remains conj…

Pure mathematicsMathematics::Algebraic GeometryHypersurfaceDiscriminantHomotopyPerturbation (astronomy)SPHERESGravitational singularityMathematics::Algebraic TopologyWedge (geometry)MathematicsMilnor number
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Quantum-state transfer via resonant tunneling through local-field-induced barriers

2013

Efficient quantum-state transfer is achieved in a uniformly coupled spin-1/2 chain, with open boundaries, by application of local magnetic fields on the second and last-but-one spins, respectively. These effective barriers induce the appearance of two eigenstates, bilocalized at the edges of the chain, which allow a high-quality transfer also at relatively long distances. The same mechanism may be used to send an entire e-bit (e.g., an entangled qubit pair) from one to the other end of the chain. DOI: 10.1103/PhysRevA.87.042313

DYNAMICSDISORDERPhysicsDOTSQuantum PhysicsENTANGLEMENT; CHAINS; PROPAGATION; DYNAMICS; DISORDER; QUBITS; DOTSCondensed matter physicsSpinsFOS: Physical sciencesPROPAGATIONSettore FIS/03 - Fisica Della MateriaAtomic and Molecular Physics and OpticsQUBITSMagnetic fieldCondensed Matter - Other Condensed MatterQuality (physics)Chain (algebraic topology)QubitCHAINSQuantum Physics (quant-ph)Quantum information scienceENTANGLEMENTLocal fieldQuantum tunnellingOther Condensed Matter (cond-mat.other)Physical Review A
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Crystal structure and absolute configuration of (4S,5R,6S)-4,5,6-trihydroxy-3-methylcyclohex-2-enone (gabosine H)

2017

The absolute configuration of the title compound, determined as 4S,5R,6S on the basis of the synthetic pathway, was confirmed by single-crystal X-ray diffraction. The mol­ecule is formed by a substituted six-membered cyclo­hexene ring adopting an envelope conformation and substituted by carbonyl, methyl and hydroxyl groups. The supra­molecular structure is mainly built by a combination of O—H⋯O and weaker C—H⋯O hydrogen bonds.

crystal structurenatural productStereochemistryCrystal structure010402 general chemistry010403 inorganic & nuclear chemistry01 natural sciencesResearch Communicationschemistry.chemical_compoundChain (algebraic topology)Screw axisPerpendicularGeneral Materials ScienceEnvelope (waves)CrystallographyChemistryHydrogen bondAbsolute configurationGeneral ChemistryMitsunobu inversion reactionCondensed Matter Physics0104 chemical sciencesabsolute configurationCrystallographyQD901-999EnoneActa Crystallographica Section E Crystallographic Communications
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ChemInform Abstract: Reactions of the Hydrofluoroborate Salts of Open-Chain Analogues of Reissert Compounds with Some α,β-Ethylenic Esters.

2010

The reaction of the hydrofluoroborate salt of an open-chain analogue of a Reissert compound with some α,β-ethylenic esters does not give a [4 + 2] cycloadduct, as previously described in the case of ethyl acrylate. The reaction starts with a 1,3-dipolar cycloaddition of a munchnone imine 5c, d. The [3 + 2] cycloadducts 13 evolve via a rearrangement–condensation sequence to give a substituted 2-pyridone derivative 18 or 19. The proposed mechanism has been verified by the isolation and structural X-ray analysis of some compounds of the reaction sequence.

chemistry.chemical_classificationChemistryStereochemistryImineSalt (chemistry)Sequence (biology)General MedicineMedicinal chemistryCycloadditionchemistry.chemical_compoundReaction sequenceChain (algebraic topology)Ethyl acrylateDerivative (chemistry)ChemInform
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KnotGenome: a server to analyze entanglements of chromosomes.

2018

Abstract The KnotGenome server enables the topological analysis of chromosome model data using three-dimensional coordinate files of chromosomes as input. In particular, it detects prime and composite knots in single chromosomes, and links between chromosomes. The knotting complexity of the chromosome is presented in the form of a matrix diagram that reveals the knot type of the entire polynucleotide chain and of each of its subchains. Links are determined by means of the Gaussian linking integral and the HOMFLY-PT polynomial. Entangled chromosomes are presented graphically in an intuitive way. It is also possible to relax structure with short molecular dynamics runs before the analysis. Kn…

0301 basic medicinePolynomialProtein ConformationGaussianPolynucleotidesBiologyType (model theory)Molecular Dynamics SimulationPrime (order theory)ChromosomesQuantitative Biology::Subcellular Processes03 medical and health sciencessymbols.namesakeMatrix (mathematics)Knot (unit)Chain (algebraic topology)GeneticsDiscrete mathematicsInternetDiagramComputational BiologyMathematics::Geometric TopologyQuantitative Biology::Genomics030104 developmental biologyWeb Server IssuesymbolsAlgorithmsSoftwareNucleic acids research
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Cohomology of Lie algebras

1995

This chapter is devoted to studying some concepts that will be extensively used in the last chapters, namely the cohomology of Lie algebras with values in a vector space, the Whitehead lemmas and Lie algebra extensions (which are related to second cohomology groups). The same three different cases of extensions of chapter 5 as well as the ℱ( M )-valued version of cohomology will be considered. In fact, the relation between Lie group and Lie algebra cohomology will be explored here, first with the simple example of central extensions of groups and algebras (governed by twococycles), and then in the higher order case, providing explicit formulae for obtaining Lie algebra cocycles from Lie gro…

PhysicsAlgebraAdjoint representation of a Lie algebraRepresentation of a Lie groupMathematics::K-Theory and HomologySimple Lie groupGroup cohomologyLie algebra cohomologyAdjoint representationMathematics::Algebraic TopologyLie conformal algebraGraded Lie algebra
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On the construction of lusternik-schnirelmann critical values with application to bifurcation problems

1987

An iterative method to construct Lusternik-Schnirelmann critical values is presented. Examples of its use to obtain numerical solutions to nonlinear eigenvalue problems and their bifurcation branches are given

Differential equationIterative methodApplied MathematicsMathematical analysisMathematics::General TopologyBifurcation diagramMathematics::Algebraic TopologyNonlinear systemBifurcation theoryTranscritical bifurcationAnalysisEigenvalues and eigenvectorsBifurcationMathematicsApplicable Analysis
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